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Prénom : François
Equipe : GeneSys
Grade : IR1
Adresse email : Cette adresse e-mail est protégée contre les robots spammeurs. Vous devez activer le JavaScript pour la visualiser.
Appartenance : IRD
Thématique : Bioinformatique et visualisation de l'informatique

Publications :

Berry V, Chevenet F, Doyon JP, Jousselin E (2018) A geography-aware reconciliation method to investigate diversification patterns in host/parasite interactions. Molecular Ecology Resources 18: 1173-1184 doi

Chevenet F, Doyon JP, Scornavacca C, Jacox E, Jousselin E, Berry V (2016) SylvX: a viewer for phylogenetic tree reconciliations. Bioinformatics 32: 608-613 doi

Mourad R, Chevenet F, Dunn DT, Fearnhill E, Delpech V, Asboe D, Gascuel O, Hue S (2015) A phylotype-based analysis highlights the role of drug-naive HIV-positive individuals in the transmission of antiretroviral resistance in the UK. AIDS 29: 1917-1925 doi

Fiorini N, Lefort V, Chevenet F, Berry V & Chifolleau AMA (2014) CompPhy: a web-based collaborative platform for comparing phylogenies. BMC Evolutionary Biology. 14: 253 doi

Chevenet F, Jung M, Peeters M, de Oliveira T & Gascuel O (2013) Searching for virus phylotypes. Bioinformatics. 29: 561-570 doi

El Baidouri F, Diancourt L, Berry V, Chevenet F, Pratlong F, Marty P & Ravel C (2013) Genetic structure and evolution of the Leishmania genus in Africa and Eurasia: what does MLSA tell us. PLoS Neglected Tropical Diseases. 7: e2255 doi

Jousselin E, Cruaud A, Genson G, Chevenet F, Foottit RG & Coeur d'Acier A (2013) Is ecological speciation a major trend in aphids? Insights from a molecular phylogeny of the conifer-feeding genus Cinara. Frontiers in Zoology. 10: 56 doi

Chevenet F, Croce O, Hebrard M, Christen R & Berry V (2010) ScripTree: scripting phylogenetic graphics. Bioinformatics. 26: 1125-1126

Croce O, Chevenet F & Christen R (2008) OligoHeatMap (OHM): an online tool to estimate and display hybridizations of oligonucleotides onto DNA sequences. Nucleic Acids Research. 36: W154-W156

Dereeper A, Guignon V, Blanc G, Audic S, Buffet S, Chevenet F, Dufayard JF, Guindon S, Lefort V, Lescot M, Claverie JM & Gascuel O (2008) Phylogeny.fr: robust phylogenetic analysis for the non-specialist. Nucleic Acids Research. 36: W465-W469 [- phylogeny.fr -]

Godreuil S, Torrea G, Terru D, Chevenet F, Diagbouga S, Supply P, van de Perre P, Carriere C & Bañuls AL (2007) First molecular epidemiology study of Mycobacterium tuberculosis in Burkina Faso. Journal of Clinical Microbiology. 45: 921-927 pdf

Baudot A, Martin D, Mouren P, Chevenet F, Guenoche A, Jacq B & Brun C (2006) PRODISTIN Web Site: a tool for the functional classification of proteins from interaction networks. Bioinformatics. 22: 248-250

Biron DG, Brun C, Lefèvre T, Lebarbenchon C, Loxdale HD, Chevenet F, Brizard JP & Thomas F (2006) The pitfalls of proteomics experiments without the correct use of bioinformatics tools. Proteomics. 6: 5577-5596 pdf

Chevenet F, Brun C, Bañuls AL, Jacq B & Christen R (2006) TreeDyn: towards dynamic graphics and annotations for analyses of trees. BMC Bioinformatics. 7: 439 pdf

Simon O, Chevenet F, Williams T, Caballero P & Lopez-Ferber M (2005) Physical and partial genetic map of Spodoptera frugiperda nucleopolyhedrovirus (SfMNPV) genome. Virus Genes. 30: 403-417

Brun C, Chevenet F, Wojcik J, Guenoche A & Jacq B (2004) Functional classification of proteins for the prediction of cellular function from a protein-protein interaction network. Genome Biology. 5: R6

Brun C, Chevenet F, Martin D, Wojcik J, Guenoche A & Jacq B (2003) Functional classification of proteins for the prediction of cellular function from a protein-protein interaction network. Genome Biology. 5: R6

Thioulouse J & Chevenet F (1996) NetMul, a World-Wide Web user interface for multivariate analysis software. Computational Statistics & Data Analysis. 21: 369-372